Identifies putative enhanceosome regions by cross-referencing candidate enhancer regions against co-TF enrichment — find_enhanceosomes • epiRomics

Identifies putative enhanceosome regions by cross-referencing candidate enhancer regions against co-TF enrichment

Usage

find_enhanceosomes(putative_enhancers, database)

Arguments

putative_enhancers: epiRomics class database containing putative enhancer calls
database: epiRomics class database containing all data initially loaded

Value

Variable of class epiRomics with enhanceosome annotations

Examples

db <- make_example_database()
eso <- make_example_enhanceosome(db)
length(annotations(eso))
#> [1] 3